publications

25. Arabidopsis transcription factor ANAC102 predominantly expresses a nuclear protein and acts as a negative regulator of methyl viologen-induced oxidative stress responses

Xiaopeng Luo, Xinqiang Jiang, Vivian Schmitt, Shubhada R Kulkarni, Huy Cuong Tran, Sylwia M Kacprzak, Frank Van Breusegem, Olivier Van Aken, Klaas Vandepoele, Inge De Clercq, Saijaliisa Kangasjärvi

(2024) - Journal of Experimental Botany

DOI
24. The transcription factor AtMYB12 is part of a feedback loop regulating cell division orientation in the root meristem vasculature

Brecht Wybouw, Helena E Arents, Baojun Yang, Jonah Nolf, Wouter Smet, Michael Vandorpe, Max Minne, Xiaopeng Luo, Inge De Clercq, Daniël Van Damme, Matouš Glanc, Bert De Rybel, Simon Turner

(2023) - Journal of Experimental Botany

DOI
23. Endoplasmic reticulum–bound ANAC013 factor is cleaved by RHOMBOID-LIKE 2 during the initial response to hypoxia in Arabidopsis thaliana

Emese Eysholdt-Derzsó, Tilo Renziehausen, Stephanie Frings, Stephanie Frohn, Kira von Bongartz, Clara P. Igisch, Justina Mann, Lisa Häger, Julia Macholl, David Leisse, Niels Hoffmann, Katharina Winkels, Pia Wanner, Jonas De Backer, Xiaopeng Luo, Margret Sauter, Inge De Clercq, Joost T. van Dongen, Jozefus Schippers, Romy Schmidt-Schippers

(2023) - Proceedings of the National Academy of Sciences

DOI
22. Proteolytic Activation of Plant Membrane-Bound Transcription Factors.

De Backer J, Van Breusegem F, De Clercq I

(2022) - Frontiers in plant science

DOI
21. Integrative inference of transcriptional networks in Arabidopsis yields novel ROS signalling regulators.

De Clercq I, Van de Velde J, Luo X, Liu L, Storme V, Van Bel M, Pottie R, Vaneechoutte D, Van Breusegem F, Vandepoele K

(2021) - Nature plants

DOI
20. Mitochondrial signalling is critical for acclimation and adaptation to flooding in Arabidopsis thaliana

Xiangxiang Meng, Lu Li, Reena Narsai, Inge De Clercq, James Whelan, Oliver Berkowitz

(2020) - The Plant Journal

DOI
19. ANAC017 Coordinates Organellar Functions and Stress Responses by Reprogramming Retrograde Signaling.

Meng X, Li L, De Clercq I, Narsai R, Xu Y, Hartmann A, Claros DL, Custovic E, Lewsey MG, Whelan J, Berkowitz O

(2019) - Plant Physiology

DOI
18. Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis

Lu Li, Anastasiya Lavell, Xiangxiang Meng, Oliver Berkowitz, Jennifer Selinski, Allison van de Meene, Chris Carrie, Christoph Benning, James Whelan, Inge De Clercq, Yan Wang

(2019) - The Plant Cell

DOI
17. SPX4 Acts on PHR1-Dependent and -Independent Regulation of Shoot Phosphorus Status in Arabidopsis

Marina Borges Osorio, Sophia Ng, Oliver Berkowitz, Inge De Clercq, Chuanzao Mao, Huixia Shou, James Whelan, Ricarda Jost

(2019) - Plant Physiology

DOI
16. Mitochondrial function modulates touch signalling in Arabidopsis thaliana.

Xu Y, Berkowitz O, Narsai R, De Clercq I, Hooi M, Vincent B, Van Breusegem F, Whelan J, Wang Y

(2019) - The Plant Journal

DOI
15. The Transcription Factor MYB29 Is a Regulator of ALTERNATIVE OXIDASE1a.

Zhang X, Ivanova A, Vandepoele K, Radomiljac J, Van de Velde J, Berkowitz O, Willems P, Xu Y, Ng S, Van Aken O, Duncan O, Zhang B, Storme V, Chan KX, Vaneechoutte D, Pogson BJ, Van Breusegem F, Whelan J, De Clercq I

(2017) - Plant Physiology

DOI
14. Cytokinin Response Factor 6 Represses Cytokinin-Associated Genes during Oxidative Stress.

Zwack PJ, De Clercq I, Howton TC, Hallmark HT, Hurny A, Keshishian EA, Parish AM, Benkova E, Mukhtar MS, Van Breusegem F, Rashotte AM

(2016) - Plant Physiology

DOI
13. Mitochondrial Defects Confer Tolerance against Cellulose Deficiency

Zhubing Hu, Rudy Vanderhaeghen, Toon Cools, Yan Wang, Inge De Clercq, Olivier Leroux, Long Nguyen, Katharina Belt, A. Harvey Millar, Dominique Audenaert, Pierre Hilson, Ian Small, Grégory Mouille, Samantha Vernhettes, Frank Van Breusegem, James Whelan, Herman Höfte, Lieven De Veylder

(2016) - The Plant Cell

DOI
12. Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases

Olivier Van Aken, Inge De Clercq, Aneta Ivanova, Simon R. Law, Frank Van Breusegem, A. Harvey Millar, James Whelan

(2016) - Plant Physiology

DOI
11. Interaction between hormonal and mitochondrial signalling during growth, development and in plant defence responses.

Berkowitz O, De Clercq I, Van Breusegem F, Whelan J

(2016) - Plant, Cell & Environment

DOI
10. Cytokinin response factors regulate PIN-FORMED auxin transporters.

Šimášková M, O'Brien JA, Khan M, Van Noorden G, Ötvös K, Vieten A, De Clercq I, Van Haperen JMA, Cuesta C, Hoyerová K, Vanneste S, Marhavý P, Wabnik K, Van Breusegem F, Nowack M, Murphy A, Friml J, Weijers D, Beeckman T, Benková E

(2015) - Nature Communications

DOI
9. The mitochondrial outer membrane AAA ATPase AtOM66 affects cell death and pathogen resistance in Arabidopsis thaliana.

Zhang B, Van Aken O, Thatcher L, De Clercq I, Duncan O, Law SR, Murcha MW, van der Merwe M, Seifi HS, Carrie C, Cazzonelli C, Radomiljac J, Höfte M, Singh KB, Van Breusegem F, Whelan J

(2014) - The Plant Journal

DOI
8. Arabidopsis ensemble reverse-engineered gene regulatory network discloses interconnected transcription factors in oxidative stress.

Vermeirssen V, De Clercq I, Van Parys T, Van Breusegem F, Van de Peer Y

(2014) - The Plant Cell

DOI
7. Anterograde and retrograde regulation of nuclear genes encoding mitochondrial proteins during growth, development, and stress.

Ng S, De Clercq I, Van Aken O, Law SR, Ivanova A, Willems P, Giraud E, Van Breusegem F, Whelan J

(2014) - Molecular Plant

DOI
6. Mitochondrial perturbation negatively affects auxin signaling.

Kerchev PI, De Clercq I, Denecker J, Mühlenbock P, Kumpf R, Nguyen L, Audenaert D, Dejonghe W, Van Breusegem F

(2014) - Molecular Plant

DOI
5. A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in Arabidopsis.

Ng S, Ivanova A, Duncan O, Law SR, Van Aken O, De Clercq I, Wang Y, Carrie C, Xu L, Kmiec B, Walker H, Van Breusegem F, Whelan J, Giraud E

(2013) - The Plant Cell

DOI
4. The membrane-bound NAC transcription factor ANAC013 functions in mitochondrial retrograde regulation of the oxidative stress response in Arabidopsis.

De Clercq I, Vermeirssen V, Van Aken O, Vandepoele K, Murcha MW, Law SR, Inzé A, Ng S, Ivanova A, Rombaut D, van de Cotte B, Jaspers P, Van de Peer Y, Kangasjärvi J, Whelan J, Van Breusegem F

(2013) - The Plant Cell

DOI
3. Identification of cis-regulatory elements specific for different types of reactive oxygen species in Arabidopsis thaliana.

Petrov V, Vermeirssen V, De Clercq I, Van Breusegem F, Minkov I, Vandepoele K, Gechev TS

(2012) - Gene

DOI
2. Perturbation of indole-3-butyric acid homeostasis by the UDP-glucosyltransferase UGT74E2 modulates Arabidopsis architecture and water stress tolerance.

Tognetti VB, Van Aken O, Morreel K, Vandenbroucke K, van de Cotte,B, De Clercq I, Chiwocha S, Fenske R, Prinsen E, Boerjan W, Genty B, Stubbs KA, Inzé D, Van Breusegem F

(2010) - The Plant Cell

DOI
1. Developmental stage specificity and the role of mitochondrial metabolism in the response of Arabidopsis leaves to prolonged mild osmotic stress.

Skirycz A, De Bodt S, Obata T, De Clercq I, Claeys H, De Rycke R, Andriankaja M, Van Aken O, Van Breusegem F, Fernie AR, Inzé D

(2009) - Plant Physiology

DOI